VIETNAM NATIONAL UNIVERSITY, HANOI LIEGE UNIVERSIFY INSTITUTE OF MICROBIOLOGY. AND BIOTECHNOLOGY xk# Trinh Thi Van Anh SCREENING AND STUDY ON MICROORGANISMS DEGRADING BIOPOLYMERS IN VIETNAM Spcciality: Biotechnology Code: 60 42 80 MASTER THESIS MAJOR BIOTECHNOLOGY SUPERVISOR: Dr. NGUYEN QUANG HUY TIANOL 2010 Table of contents INTRODUCTION. CHAPTER 1: LITERATURE REVIEW.
PLASTIC WASEE POLLUƯTION.1 Plasic waste poliution in the world, we 1. Plastic waste polhion in Vietnam.3, Treatment of plastic waste. BIODEGRADABLE PLASTICS oo 1. THE DEGRADATION OF BIOPOLYMERS wesc T7 14 MICROORGANISMS DEGRADING BIODEGRADABLE POLYMERS | 19 1.
Microorganisms degrading PLA. Microorganisms degrading PHB.3, Microorganisms degrading PCL. CHAPTER 2: MATERIALS AND METHODS. Isolation of biopolymer-degrading microorganisms 2.2, Screening biopalymer-degrading microorganisms 2.3, Identification of biopolymers-degrading strains.
Gram staining method. Observgtion under soarming elecron mieroscopy (SBM). Extraction of genomic DNA from bacteria 0 3. Amplification of the 168 rDNA PCR reaction.
Agarose gel electrophoresis. HHu re ¬ BO 14. Effect of culture conditions al 2.8, Utilization of of sugars. Activity of some extracellular enzymes.4, Siudy dugradation dƒ biodegraduble polymers by isolaled sirains.
Growth experiment in the PLA, PHB or PCL containing media 32 2. Measurement of the PLA, PHB or PCL residual weighht.3, Determination of TOC in culture broth. Dogradation oxperirment with biopolyrner Blm. Statistioal analysis 34 CHAPTER 3: RESULTS AND DISCUSSION: 3.1, ISOLATION AND SCREENING PLA, PHB, PCL-DEGRADING ORGANISMS.2, PLA-DEGRADING MICROORGANISMS w.ccscssessonesees sorenes sonmne nse e 3 3.1, Identification of strains G5 and Cl.1 Morphology of strain GS and Czt 38 3.
165 DNA sequencing of strain G5. Biochemical and physiological charactorisios of strairs G5 and Cz1. PLA degradation by S. thermoflavus GS and P, citrintam Cal 3.
PHB-DEGRADING MICROURGANISM. Master thests 2010 Abstract Nowaday, plastic waste is the most attrative issue in the world Biodegradable polymers are seen as a promising solution to this problem because they are environmentally-friendly. Because of chenucal and physical feature that are suitable for application in many fields and their degradable ability, they were used more and more for reducing the plastic waste pollution Among many biodegradable polymers, poly(T.-lactic acid) (PLA), poly(3-hydroxybulyrale) PHB, and poly(e-caprolactone) (PCT) seem to be of the ost allention. PHB and lactic acid (raw materials for PLA) can be produced in fermentative biotechnological processes using agricultural products and microorganisms, while PCL was a kind of polymer derived from petroleum, and all of them can be degraded by microorganisms.
Several aerobic and anaerobic polymer-degrading microorganisms have been isolated from soil, activated and aerobic sludge, seawater and lake water. From 24 samples collected from different locations in Hanoi, Viemmam $ strains degrading PLA, & strains degrading PHB and 6 strains degrading PCL were selected by clear zone formed method. Among them, strain G5 and strain Cz] had the highest PLA-degrading activity, stram 132 and strain 131 presented the highest degrading activity on P13 and PCL, respectively. [ased on morphological, 168 rDNA sequencing, biochemical and physiological characteristics, strain G5 was identificd as Streptompces thermoflavus, strain Czl was proposed as Penicillium cirinium, siram B2 was named as Bacilles gelatmi, and stra Bl was Brevibacillus agri.
All strains grew well at pH 6-7, and NaCl concentration from 1% to 3% Among these strains, the optim temperature of B. gelatini B2 and Br. agri Bl were around 50°C, S. thermoflavus G5 was 37°C, and P.
To study the polymer degradation of these strains, total organic carbon concentration (LOC) and polymer weight in the medium after culture were determined After 30 days of cultivation in the optimum conditions, strain $. citrinum Cz] degraded 55.5% of initial PLA residual in the medium, while strain B. gelutind B2 and Br. agri Bl degraded 58.5% and 84% of PHB and PCT.
imtially added into the medium, respectively. Study on the degradation of polymers showed thal these strams were capable of degradation PLA, PLB and PCL and these strains presented higher activity of degradation PCL than PLA and PIIB. In the future, we also intend to study further about the enzymes that degrade PLA, PIIB and PCL and apply them to biodegradation in the nature envionment. Key words: biopolymer, poly(L-lactic acid), poly(3-hydroxybytyrate), poly(e-caprolactone), biodegradable.
eink Thi Jan Ank Master thests 2010 Abstract Nowaday, plastic waste is the most attrative issue in the world Biodegradable polymers are seen as a promising solution to this problem because they are environmentally-friendly. Because of chenucal and physical feature that are suitable for application in many fields and their degradable ability, they were used more and more for reducing the plastic waste pollution Among many biodegradable polymers, poly(T.-lactic acid) (PLA), poly(3-hydroxybulyrale) PHB, and poly(e-caprolactone) (PCT) seem to be of the ost allention. PHB and lactic acid (raw materials for PLA) can be produced in fermentative biotechnological processes using agricultural products and microorganisms, while PCL was a kind of polymer derived from petroleum, and all of them can be degraded by microorganisms. Several aerobic and anaerobic polymer-degrading microorganisms have been isolated from soil, activated and aerobic sludge, seawater and lake water.
From 24 samples collected from different locations in Hanoi, Viemmam $ strains degrading PLA, & strains degrading PHB and 6 strains degrading PCL were selected by clear zone formed method. Among them, strain G5 and strain Cz] had the highest PLA-degrading activity, stram 132 and strain 131 presented the highest degrading activity on P13 and PCL, respectively. [ased on morphological, 168 rDNA sequencing, biochemical and physiological characteristics, strain G5 was identificd as Streptompces thermoflavus, strain Czl was proposed as Penicillium cirinium, siram B2 was named as Bacilles gelatmi, and stra Bl was Brevibacillus agri. All strains grew well at pH 6-7, and NaCl concentration from 1% to 3% Among these strains, the optim temperature of B.
gelatini B2 and Br. agri Bl were around 50°C, S. thermoflavus G5 was 37°C, and P. To study the polymer degradation of these strains, total organic carbon concentration (LOC) and polymer weight in the medium after culture were determined After 30 days of cultivation in the optimum conditions, strain $.
citrinum Cz] degraded 55.5% of initial PLA residual in the medium, while strain B. gelutind B2 and Br. agri Bl degraded 58.5% and 84% of PHB and PCT. imtially added into the medium, respectively.
Study on the degradation of polymers showed thal these strams were capable of degradation PLA, PLB and PCL and these strains presented higher activity of degradation PCL than PLA and PIIB. In the future, we also intend to study further about the enzymes that degrade PLA, PIIB and PCL and apply them to biodegradation in the nature envionment. Key words: biopolymer, poly(L-lactic acid), poly(3-hydroxybytyrate), poly(e-caprolactone), biodegradable. eink Thi Jan Ank 3.1, Identification of strain B2.
Morphology of strain B2. Sequencing 168 DNA gene of strain B2 48 3. Biochemical and physiological characteristios of sirain B2.2, PHB degradation by B.4 PCL-DEGRADING MICROORGANISM .1, Identification of strain B1 55 3. Morphology of strain BL 55 3.
Sequencing 16B rDNA gene of sưain Bì. Biochemical and physiological characteristics of stra BI 37 3.2, PCL degradation by Br.5 DEGRADATION OF POLYMERS BY ISOLATED STRAINS 6l CONCLUSIONS. WEB REFERENCES Master thests 2010 Abstract Nowaday, plastic waste is the most attrative issue in the world Biodegradable polymers are seen as a promising solution to this problem because they are environmentally-friendly. Because of chenucal and physical feature that are suitable for application in many fields and their degradable ability, they were used more and more for reducing the plastic waste pollution Among many biodegradable polymers, poly(T.-lactic acid) (PLA), poly(3-hydroxybulyrale) PHB, and poly(e-caprolactone) (PCT) seem to be of the ost allention.
PHB and lactic acid (raw materials for PLA) can be produced in fermentative biotechnological processes using agricultural products and microorganisms, while PCL was a kind of polymer derived from petroleum, and all of them can be degraded by microorganisms. Several aerobic and anaerobic polymer-degrading microorganisms have been isolated from soil, activated and aerobic sludge, seawater and lake water. From 24 samples collected from different locations in Hanoi, Viemmam $ strains degrading PLA, & strains degrading PHB and 6 strains degrading PCL were selected by clear zone formed method. Among them, strain G5 and strain Cz] had the highest PLA-degrading activity, stram 132 and strain 131 presented the highest degrading activity on P13 and PCL, respectively.
[ased on morphological, 168 rDNA sequencing, biochemical and physiological characteristics, strain G5 was identificd as Streptompces thermoflavus, strain Czl was proposed as Penicillium cirinium, siram B2 was named as Bacilles gelatmi, and stra Bl was Brevibacillus agri. All strains grew well at pH 6-7, and NaCl concentration from 1% to 3% Among these strains, the optim temperature of B. gelatini B2 and Br. agri Bl were around 50°C, S.
thermoflavus G5 was 37°C, and P. To study the polymer degradation of these strains, total organic carbon concentration (LOC) and polymer weight in the medium after culture were determined After 30 days of cultivation in the optimum conditions, strain $. citrinum Cz] degraded 55.5% of initial PLA residual in the medium, while strain B. gelutind B2 and Br.
agri Bl degraded 58.5% and 84% of PHB and PCT. imtially added into the medium, respectively. Study on the degradation of polymers showed thal these strams were capable of degradation PLA, PLB and PCL and these strains presented higher activity of degradation PCL than PLA and PIIB. In the future, we also intend to study further about the enzymes that degrade PLA, PIIB and PCL and apply them to biodegradation in the nature envionment.
Key words: biopolymer, poly(L-lactic acid), poly(3-hydroxybytyrate), poly(e-caprolactone), biodegradable. eink Thi Jan Ank Master thests 2010 dé 50°C, trong khi S. citriniun phat triển lật nhất. Khả năng phản hủy các polymer của các chủng dược tiến hành trong môi trường chứa polymer là nguồn cácbon và năng lượng duy nhất và đánh giá qua hàm lượng các bọn tổng số (TOC) trong dịch nuôi cây sau khi ly tâm và lượng polyrner còn lại.
thermoflavus GS phin hiy duge 46. citrinun Cz1 phân hủy được 55.5% luong PLA bd sung ban đầu, trong khi B. gelatini B2 va Br. agri B1 tương ửng phân hủy dược 58.5% va 84% PHB va PCL.
Cac ching vi sinh vật trên có khá năng phân huý cá 3 loại polymer sinh học dửng trong nghiên cứu, trong đỏ hoạt tính phân huỷ PCL cao hơn so véi PLA va PHB. Che enzyme phan hủy polymer sinh học cũng như các điều kiện phát triển tối ưu của các chủng vi sinh vật này đang được nghiên cứn nhằm mục đích ứng dụng chứng trong việc xử lý ô xihiễm môi trường. Tử khóa: biopolymer, poly(L-lactie acid), poly(3-hydroxybytyrate), poly(e- caprolactone), biodegradable. eink Thi Jan Ank Master thests 2010 Luận văn thạc sỹ: Sereening and study on mi norganisms đegrading of biopolymers in Vietmam Chuyên ngành.
Công nghệ Sinh học Sinh viên: Trịnh Thị Yên Anh Cân bộ hướng dân khoa học: TS. Nguyén Quang Huy TOM TAT Trong những năm gân dây việc sử dụng một cách trấn lan các sản phẩm nhựa tổng hợp có nguẻn gốc từ hoá dâu như polyprepylen ŒP), polyetylen (PE), polyvinylelorus (PVƠ). làm gia tăng ô nhiễm môi trường trên thể giới. Để giâm thải ö nhiễm rác thải do việc sử dụng các loại nhựa tổng hợp này nhiều quốc gia đã và đang sử dụng thay thế chứng bằng các sản phẩm thân thiện mỗi trường là các loại.
polymer sinh học. Trong số các polymer sinh học poly(lactie aoid) (PLA), poly(3- hydroxybuyrat) (PLI) và poly(e-caprolaotene} (PCL) lá các polymer được chú ý nhiều nhất. Các polymer sinh học này tuy khác nhau vẻ tính chất lý, hoá học nhưng, chúng dều có ưu diểm chung là cỏ thẻ phân huýỹ thành các thành phần cơ bản như CO; va 11,0, do đó không gây ô nhiễm môi trường. Các polymer sinh hoe trong điêu kiện tự nhiên thường phân hủy chậm và phải mật một khoảng thời gian đài đề quá trình tự phân hủy bắt đâu điển ra.
Việc phân lập các ching vi smh val.